🦠 Clostridium perfringens in Water

Microbiology PN-EN ISO 14189

In short

Quantitative determination of vegetative cells and spores of Clostridium perfringens in water by membrane filtration method on TSC medium under anaerobic conditions. The test is performed according to PN-EN ISO 14189:2016; Result: cfu/100 mL (colony forming units). The procedure comprises 11 steps (about 1 days 4 h 17 min in total); it is used for: Control of drinking water quality — indicator parameter (MoH Regulation), Assessment of filtration process effectiveness in water treatment stations, Detection of old fecal contamination of groundwater.

At a glance

  • Standard: PN-EN ISO 14189:2016
  • Category: Microbiology
  • Procedure steps: 11
  • Total time of stages: 1 days 4 h 17 min
  • Result: cfu/100 mL (colony forming units)
  • Permissible value (drinking water): 0 cfu/100 mL (including spores)
  • Incubation temperature: 44 ± 1°C

Overview

Clostridium perfringens is an anaerobic, spore-forming Gram-positive bacterium, whose presence in water indicates exclusively fecal contamination. C. perfringens spores are extremely resistant to chemical disinfection (chlorination, ozonation), UV radiation, pH and temperature changes — they can survive in aquatic environment for months or even years.

This exceptional resistance makes C. perfringens a valuable supplementary indicator to E. coli and enterococci. Detection of C. perfringens spores in treated water indicates insufficient effectiveness of filtration processes and may indicate old fecal contamination, even when E. coli and enterococci are no longer detectable.

The method according to PN-EN ISO 14189 includes membrane filtration of water sample, placing the membrane on TSC medium (Tryptose Sulphite Cycloserine — tryptose-sulfite-cycloserine agar) and incubation under anaerobic conditions at 44±1°C for 21±3 hours. C. perfringens reduces sulfites to sulfides, which react with iron salt in the medium, forming black colonies. Cycloserine inhibits growth of Bacillus species.

C. perfringens is an indicator parameter of drinking water according to MoH Regulation. Its detection in treated water should result in assessment of filtration process effectiveness and verification of barrier system in water treatment plant.

Method principle

The water sample (or its dilution) is filtered through a 0.45 µm membrane, which is then placed on the surface of TSC medium (Tryptose Sulphite Cycloserine agar). The medium contains sodium sulfite (Na₂SO₃) and ferric ammonium citrate — C. perfringens reduces sulfite to sulfide (S²⁻), which forms black FeS precipitate with iron ions, giving characteristic black colonies. Cycloserine (400 mg/L) selectively inhibits Bacillus spp. Incubation under anaerobic conditions (anaerobic jar with gas generator) at 44±1°C enhances selectivity towards C. perfringens.

Applications

Key parameters

ParameterValue
Resultcfu/100 mL (colony forming units)
Permissible value (drinking water)0 cfu/100 mL (including spores)
Incubation temperature44 ± 1°C
Incubation time21 ± 3 hours
Incubation conditionsAnaerobic (anaerobiosis)
Sample volume100 mL (standard)

Standard

Standard number
PN-EN ISO 14189:2016
Title (PL)
Jakość wody — Oznaczanie ilościowe Clostridium perfringens — Metoda filtracji membranowej
Title (EN)
Water quality — Enumeration of Clostridium perfringens — Method using membrane filtration

Step-by-step procedure

  1. Workstation preparation

    Sterilize filtration set. Prepare TSC plates with cycloserine supplement. Check incubator temperature (44°C).

    ⏱ Time: 20 min

  2. Preliminary sample heating (optional)

    For determination of spores only: heat sample in water bath 75°C for 15 min — kills vegetative forms. For vegetative forms + spores: skip this step.

    ⏱ Time: 20 min • 🌡 Temperature: 75°C

  3. Chlorine neutralization

    Add sodium thiosulfate to tap water sample. Mix.

    ⏱ Time: 2 min

  4. Membrane filtration

    Filter 100 mL sample through 0.45 µm filter. Rinse funnel with sterile peptone water.

    ⏱ Time: 5 min

  5. Placement on TSC medium

    Transfer filter with sterile forceps to TSC medium surface. Pour thin layer of TSC medium (overlay 5 mL) to create anaerobic conditions on surface.

    ⏱ Time: 5 min

  6. Anaerobic incubation

    Place plate in anaerobic jar. Insert AnaeroGen sachet and indicator strip. Seal jar tightly. Incubate at 44±1°C for 21±3 h.

    ⏱ Time: 21 ± 3 h • 🌡 Temperature: 44 ± 1°C

  7. Result reading

    Open jar. Count black colonies within 30 minutes — color fades quickly after contact with air! Black/gray colonies = presumptive C. perfringens.

    ⏱ Time: 10 min

  8. Confirmation — acid phosphatase test

    Transfer colonies to filter paper. Apply acid phosphatase reagent (α-naphthyl phosphate). Pink coloration in 1–2 min = acid phosphatase (+) = confirmed C. perfringens.

    ⏱ Time: 5 min

  9. Subculture on blood agar (optional)

    Transfer colonies to blood agar. Incubate anaerobically 37°C/24 h. C. perfringens gives double zone of hemolysis (beta-hemolysis).

    ⏱ Time: 24 h • 🌡 Temperature: 37°C

  10. Result calculation

    Result = number of confirmed black colonies / sample volume × 100. Report in cfu/100 mL.

  11. Quality control

    Positive control: C. perfringens ATCC 13124. Negative control: sterile water. Check anaerobiosis indicator strip.

    ⏱ Time: 10 min

Required equipment and apparatus

EquipmentExampleIndicative price
Membrane filtration systemSartorius Combisart, Merck EZ-Fit3,000–12,000 PLN
Anaerobic jar 2.5 LOxoid AG0025A, Merck Anaerocult800–2,000 PLN
Anaerobic atmosphere generatorsOxoid AnaeroGen AN0025A, Merck Anaerocult A50–100 PLN/pc (sachets)
Incubator 44°CBinder BD 56, Memmert IN30plus6,000–18,000 PLN
Vacuum pumpKNF Laboport N 8103,000–8,000 PLN
AutoclaveTuttnauer ELV 254020,000–45,000 PLN
Magnifier / colony counterStuart SC6+, Interscience Scan 5001,500–25,000 PLN

Reagents, media and consumables

ReagentCASDetails
TSC Agar (Tryptose Sulphite Cycloserine)Selective medium without egg yolk. Composition: casein hydrolysate, yeast extract, sodium sulfite, ferric ammonium citrate, agar. Manufacturers: Oxoid, Merck, Biokar
Cycloserine supplement68-41-7D-Cycloserine, final concentration 400 mg/L. Inhibits growth of Bacillus spp.
Membrane filters 0.45 µmMCE, 47 mm, sterile. Merck Millipore, Sartorius
AnaeroGen sachetsAnaerobic atmosphere generators for 2.5 L jars. O₂ reduction < 1% in 30 min
Anaerobiosis indicator stripsOxoid Anaerobic Indicator BR0055 — control of anaerobic conditions in jar
Acid phosphatase test reagentα-naphthyl phosphate solution + diazo reagent. For C. perfringens confirmation (acid phosphatase+)
Blood agar (nutrient with 5% sheep blood)For subculture and confirmation of hemolytic C. perfringens
Sodium thiosulfate (Na₂S₂O₃)7772-98-7Neutralization of chlorine in tap water samples

Health and safety (OHS)

Frequently asked questions

Which standard describes this test?

The test is performed according to PN-EN ISO 14189:2016 — “Water quality — Enumeration of Clostridium perfringens — Method using membrane filtration”.

How does this method work?

The water sample (or its dilution) is filtered through a 0.45 µm membrane, which is then placed on the surface of TSC medium (Tryptose Sulphite Cycloserine agar).

What is the measuring range and accuracy?

Result: cfu/100 mL (colony forming units); Permissible value (drinking water): 0 cfu/100 mL (including spores); Incubation temperature: 44 ± 1°C; Incubation time: 21 ± 3 hours.

How long does the test take?

The times given for the individual stages add up to approximately 1 days 4 h 17 min. The procedure comprises 11 steps.

What equipment is required?

Membrane filtration system, Anaerobic jar 2.5 L, Anaerobic atmosphere generators, Incubator 44°C, Vacuum pump, Autoclave, Magnifier / colony counter. Indicative cost of the core instrument (Membrane filtration system): 3,000–12,000 PLN.

Where is this test used?

Control of drinking water quality — indicator parameter (MoH Regulation); Assessment of filtration process effectiveness in water treatment stations; Detection of old fecal contamination of groundwater; Monitoring of surface waters used as drinking water sources; Testing of water after water supply network failures; Assessment of integrity of membrane systems (UF, NF) in treatment plants.

What safety precautions apply?

C. perfringens produces toxins (alpha, beta, epsilon, iota) — potentially dangerous pathogen. Full personal protective equipment; Work under anaerobic conditions — jars under pressure, open carefully; Cycloserine — antibiotic, avoid skin contact, work with gloves; Sodium azide (in media) — highly toxic, do not acidify (releases toxic HN₃); Infectious material — autoclave 121°C/30 min before disposal; Acid phosphatase reagent — irritating, use in fume hood.

Which laboratory can perform this test?

The test is performed by laboratories accredited to ISO/IEC 17025. On LabCoda you can find them by the standard number PN-EN ISO 14189.

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